RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-5613
Malaria parasiteP. yoelii
Genotype
TaggedGene model (rodent): PY17X_0418900; Gene model (P.falciparum): PF3D7_0905300; Gene product: dynein heavy chain, putative (DHC1)
Name tag: sextuple HA
Phenotype Asexual bloodstage; Gametocyte/Gamete; Fertilization and ookinete; Oocyst; Sporozoite;
Last modified: 26 February 2025, 21:39
  *RMgm-5613
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene tagging
Reference (PubMed-PMID number) Reference 1 (PMID number) : 39366980
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. yoelii
Parent strain/lineP. y. yoelii 17XNL
Name parent line/clone Not applicable
Other information parent line
The mutant parasite was generated by
Name PI/ResearcherLiu B, Yuan J
Name Group/DepartmentState Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Li
Name InstituteXiamen University
CityXiamen
CountryChina
Name of the mutant parasite
RMgm numberRMgm-5613
Principal nameDHC1-6HA
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageNo expression in blood stages
Gametocyte/GameteExpression in male gametocytes, no expression in female gametocytes
Fertilization and ookineteNo expression in ookinetes
OocystNo expression in oocysts
SporozoiteNo expression in sporozoites
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
The mutant expresses a C-terminal 6xHA-tagged version of DHC1

Protein (function)
There are 7 genes encoding putative dynein heavy chain (DHC) proteins of Plasmodium parasites. In the rodent malaria parasite P. yoelii, they are PY17X_0418900 (dhc1), PY17X_0618400 (dhc2), PY17X_0215400 (dhc3), PY17X_0508400 (dhc4), PY17X_0927400 (dhc5), PY17X_0603800 (dhc6), and PY17X_1333900 (dhc7).
Each dynein contains at least one dynein heavy chain (DHC) and other subunits including the intermediate chain (IC), light intermediate chain (LIC), and light chain (LC).

The invasive “zoite” stages of Plasmodium, including the ookinete, sporozoite, and merozoite, are morphologically polarized and possess a unique cortical pellicle underneath the parasite plasma membrane. From outside to inside, the pellicle consists of a double membrane organelle inner membrane complex (IMC) and a cytoskeleton layer of apically radiating subpellicular microtubules (SPMTs), both of which associate with each other and span along the periphery of the zoite parasites. Besides SPMTs, the invasive zoites of apicomplexan parasites possess a highly specialized structure called the apical polar ring (APR) at the cell apical cortex. APR is recognized as an electron-lucent region beneath the apical IMC. it is believed that APR functions as a microtubule-organizing center (MTOC) for nucleating SPMTs at the Plasmodium zoites. In Plasmodium, the SPMT cytoskeleton functions as a scaffold supporting parasite morphogenesis, maintaining the polarized cell shapes and providing parasite rigidity during gliding and invasion. In the process of ookinete growth, the parasite undergoes massive expansion of the plasma and cortex membrane. In addition, the ookinete acquires a complete set of apical organelles and structures via de novo assembly. IMC is assembled at the apical site of the initial protrusion and extends along the expanding plasma membrane to the basal end. After biogenesis,APR nucleates the assembly of apical SPMTs underling the IMC. Meanwhile, the apical tubulin ring (ATR), another compacted structure of MTs, emerges at the apex of ookinetes.While the IMC, SPMT, APR, ATR, and microneme are essential for either development, gliding, or midgut invasion of ookinetes, the mechanisms for de novo assembly of these organelles and structures at the apical distal area are largely unknown. We hypothesize that besides playing a cytoskeleton role, the apically radiating SPMTs may function as the tracks for the apical transport of cargoes containing the contents required for the assembly of apical organelles and structures in the ookinetes. In this scenario, the cytoplasmic dynein could be the primary motor moving towards the minus end of SPMTs for cargo transport to the apical distal area of ookinetes. However, the SPMT-based dynein transport machinery has not been identified in Plasmodium. Cytoplasmic dynein is a large multi-subunit protein complex, and the core is a homodimer of two heavy chain subunits (DHCs) interacting with intermediate, light intermediate, and light chain subunits

Phenotype
No expression in asexual blood stages. Expression in male gametocytes. No expression in female gametocytes, ookinetes, oocysts and sporozoites.

Additional information
The seven dhc-genes were tagged with a sextuple HA epitope (6HA) to analyse the
expression and localization of these proteins. See the mutants RMgm-5613 (PY17X_0418900-6HA; dhc1), RMgm-5614 (PY17X_0618400-6HA; dhc2), RMgm-5615 (PY17X_0215400-6HA; dhc3, RMgm-5616 (PY17X_0508400-6HA; dhc4), RMgm-5617 (PY17X_0927400-6HA; dhc5), RMgm-5618 (PY17X_0603800-6HA; dhc6), RMgm-5619 PY17X_1333900-6HA; dhc7). These 6HA-tagged parasite lines showed normal asexual blood stage proliferation and gametocyte differentiation in mice, suggesting that the addition of 6HA did not affect parasite viability. Immunofluorescence assay (IFA) showed that all 7 DHCs displayed no detectable expression in the asexual blood stages. Only DHC3 was expressed in female gametocytes, ookinetes, and sporozoites. The other 6 DHCs were specifically expressed in male gametocytes. DHC3 was evenly distributed along the periphery of ookinetes, suggesting the existence of SPMT-based dynein in the ookinetes.

Two parasite lines dhc3::3V5 and 4Myc::dhc3 were generated with endogenous DHC3 tagged with 3V5 at the C-terminus and with 4Myc at the N-terminus, respectively. Both DHC3::3V5 and 4Myc::DHC3 proteins displayed similar localization at the ookinetes.
To visualize DHC3 localization in living ookinetes, a parasite line was generated, dhc3::mScarlet, with DHC3 C-terminally tagged with a red fluorescence protein mScarlet (see mutant RMgm-5621). The mScarlet-tagged DHC3 was also distributed along the periphery of ookinetes.These results suggested the existence of the SPMT-based cytoplasmic dynein in the ookinetes and DHC3 is likely a subunit of the dynein complex.

 From the paper:
The cortical cytoskeleton of subpellicular microtubules (SPMTs) supports the Plasmodium ookinete morphogenesis during mosquito transmission of malaria. SPMTs are hypothesized to function as the cytoskeletal tracks in motor-driven cargo transport for apical organelle and structure assembly in ookinetes. We identify the core subunit DHC3 and other subunits of dynein showing co-localizing with SPMTs in the ookinete. In-depth phenotypical and functional analyses demonstrate that SPMT-based dynein plays an essential role in ookinete morphogenesis, shape, and gliding motility. DHC3 disruption impairs ookinete development, shape, and gliding, leading to failure in mosquito infection of Plasmodium. The DHC3-deficient ookinetes display defective formation or localization of apical organelles and structures. Rab11A and Rab11B interact with DHC3 at SPMTs in a DHC3-dependent manner, likely functioning as the receptors for the cargoes driven by SPMT-dynein. Disturbing Rab11A or Rab11B phenocopies DHC3 deficiency in ookinete morphogenesis. This study confirms the existence of the SPMT-based cytoplasmic dynein motor in the ookinetes and reveals its importance in intracellular cargo transport in ookinete morphogenesis.

Other mutants


  Tagged: Mutant parasite with a tagged gene
Details of the target gene
Gene Model of Rodent Parasite PY17X_0418900
Gene Model P. falciparum ortholog PF3D7_0905300
Gene productdynein heavy chain, putative
Gene product: Alternative nameDHC1
Details of the genetic modification
Name of the tagsextuple HA
Details of taggingC-terminal
Additional remarks: tagging
Commercial source of tag-antibodies
Type of plasmid/constructCRISPR/Cas9 construct: integration through double strand break repair
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr/yfcu
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationThe CRISPR-Cas9 plasmid pYCm was used for gene editing. To construct vectors for gene deletion, the left and right homologous arms consisted of 400–700 bp sequences upstream and downstream of the coding sequences of the target gene. To construct plasmids for gene tagging, the 5′- and 3′-flanking sequences (300–700 bp) at the designed insertion site of target genes were amplified as homologous templates. DNA fragments encoding 6HA, 4Myc, 3V5, and mScarlet were placed between them and in-frame with the target gene. For eachmodification, at least two small guide RNAs (sgRNAs) were designed using the online program EuPaGDT (http://grna.ctegd.uga.edu/).
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6