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Type and details of transgene |
Is the transgene Plasmodium derived |
Transgene: not Plasmodium |
Transgene name | GFP (mut3) |
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Details of the genetic modification |
Inducable system used | No |
Additional remarks inducable system |
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Type of plasmid/construct | Plasmid single cross-over |
PlasmoGEM (Sanger) construct/vector used | No |
Modified PlasmoGEM construct/vector used | No
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Plasmid/construct map |
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Plasmid/construct sequence |
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Restriction sites to linearize plasmid |
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Selectable marker used to select the mutant parasite | tgdhfr |
Promoter of the selectable marker | eef1a |
Selection (positive) procedure | pyrimethamine |
Selection (negative) procedure | No |
Additional remarks genetic modification | A 2.6 kb promoter fragment of the ctrp gene CTRPp) was amplified with the following PCR primers including PstI and BamHI sites, respectively, CTRPp-F: 5'-AAAACTGCAGTGAATATAATCGTACTATGAAAAC-3' and CTRPp-R: 5'-GCGGGATCCTTGTGTTTTGCTTTGTATTTAA-3'.
The ctrp promoter (CTRPp) was recloned as a PstI-BamHI fragment into a pUC19-derived plasmid, upstream of a 0.7 kb Pbs21 3'-UTR fragment, to give the pCTRPp.-.Sb plasmid vector. The gfp gene, was cloned as a BamHI fragment introduced into this plasmid between CTRPp and Pbs21 3'UTR. This expression cassette was cloned in a vector containing the d-ssu-rra gene as target sequence for homologous recombination by single cross-over integration of the construct. |
Additional remarks selection procedure | |
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Other details transgene |
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Promoter |
Gene Model of Parasite |
PBANKA_0412900
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Gene Model P. falciparum ortholog |
PF3D7_0315200
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Gene product | circumsporozoite- and TRAP-related protein |
Gene product: Alternative name | |
Primer information details of the primers used for amplification of the promoter sequence
Primer information details of the primers used for amplification of the promoter sequence
Sequence Primer 1 | 5'-AAAACTGCAGTGAATATAATCGTACTAT GAAAAC-3' |
Additional information primer 1 | CTRPp-F |
Sequence Primer 2 | 5'-GCGGGATCCTTGTGTTTTGCTTTGTATTTAA-3' |
Additional information primer 2 | CTRPp-R |
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3'-UTR |
Gene Model of Parasite |
PBANKA_0514900
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Gene product | 28 kDa ookinete surface protein |
Gene product: Alternative name | Pbs21; P28 |
Primer information details of the primers used for amplification the 3'-UTR sequences
Primer information details of the primers used for amplification the 3'-UTR sequences
Sequence Primer 1 | 5'-AAT GCA CAG GTA CAG GAG AAA CTA AAT-3' |
Additional information primer 1 | Pbs21-F |
Sequence Primer 2 | 5'-CAC ACT CAT AAT GTT TTC CAG TCA ATT-3' |
Additional information primer 2 | Pbs21-R |
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Insertion/Replacement locus |
Replacement / Insertion | Insertion locus |
Gene Model of Parasite |
Not available
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Gene product | Not available |
Gene product: Alternative name | small subunit ribosomal rna gene (d-type unit) |
Primer information details of the primers used for amplification of the target sequences
Primer information details of the primers used for amplification of the target sequences
Sequence Primer 1 | |
Additional information primer 1 | |
Sequence Primer 2 | |
Additional information primer 2 | |
Sequence Primer 3 | |
Additional information primer 3 | |
Sequence Primer 4 | |
Additional information primer 4 | |
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