RMgmDB - Rodent Malaria genetically modified Parasites

Summary

RMgm-5645
Malaria parasiteP. berghei
Genotype
TaggedGene model (rodent): PBANKA_0821000; Gene model (P.falciparum): PF3D7_0920100; Gene product: chaperone, putative (HscB (heat shock cognate B))
Name tag: GFP
Transgene
Transgene not Plasmodium: mCherry
Promoter: Gene model: PBANKA_0711900; Gene model (P.falciparum): PF3D7_0818900; Gene product: heat shock protein 70 (HSP70)
3'UTR: Gene model: PBANKA_0711900; Gene product: heat shock protein 70 (HSP70)
Replacement locus: Gene model: PBANKA_0306000; Gene product: 6-cysteine protein (230p)
Transgene
Transgene not Plasmodium: Luciferase
Promoter: Gene model: PBANKA_1133300; Gene model (P.falciparum): PF3D7_1357100; Gene product: elongation factor 1-alpha (eef1a)
3'UTR: Gene model: PBANKA_0719300; Gene product: bifunctional dihydrofolate reductase-thymidylate synthase, putative (dhfr/ts)
Replacement locus: Gene model: PBANKA_0306000; Gene product: 6-cysteine protein (P230p)
Phenotype Asexual bloodstage; Oocyst; Liver stage;
Last modified: 1 November 2025, 12:28
  *RMgm-5645
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Gene tagging, Introduction of a transgene, Introduction of a transgene
Reference (PubMed-PMID number) Reference 1 (PMID number) : 39739824
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone RMgm-1320
Other information parent lineThis transgenic reporter line (1868cl1; RMgm-1320) expresses luciferase under the control of the eef1α (PBANKA_1133300) promoter and, in addition, mCherry under the control of the hsp70 (PBANKA_0711900) promoter. Both reporter cassetes are introduced into the silent 230p locus, using a single DNA construct. This transgenic line does not contain a drug-selectable marker.
The mutant parasite was generated by
Name PI/ResearcherSchmid M, Heussler V, Roques M
Name Group/DepartmentInstitute of Cell Biology
Name InstituteUniversity of Bern
CityBern
CountrySwitzerland
Name of the mutant parasite
RMgm numberRMgm-5645
Principal namePbHscB-GFP
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stageEvidence for expression in asexual blood stages as shown by flow-cytometric analysis
Gametocyte/GameteNot tested
Fertilization and ookineteNot tested
OocystExpression in oocysts. On day 12 post-feeding, we extracted midguts from the mosquitoes and stained them with the mitochondrial dye MitoView 650, while DNA was stained with Hoechst 33342. Live confocal microscopy imaging revealed overlapping signals between PbHscB-GFP and the mitochondrial dye, indicating that PbHscB-GFP localized to the mitochondria at this stage
SporozoiteNot tested
Liver stageExpression in (maturing/mature) liver stages. The cells were fixed at 48 and 56 hours post-infection (hpi) and stained with antibodies against GFP and Toxoplasma gondii Hsp70 (TgHsp70), which has been shown to recognize P. berghei mitochondrial Hsp70. Although PbHscB-GFP expression was weak, a clear overlap between the PbHscB-GFP signal and the mitochondrial marker TgHsp70 was observed at both time points
Additional remarks phenotype

Mutant/mutation
The mutant expression a C-terminal GFP-tagged version of HscB. It also expresses mCherry and luciferase under constitutive promoters. 

Protein (function)
HscB is a putative mitochondrial iron-sulfur (Fe-S) protein assembly chaperone HscB (heat shock cognate B). HscB belongs to the Hsp40 protein family, known as heat shock cognate B chaperones, and it operates in conjunction with an Hsp70 family member, HscA, for the assembly of Fe-S proteins. Fe-S proteins possess an iron sulfur cluster (ISC) as a cofactor, enabling efficient electron transport and involvement in various cellular redox reactions. Examples of Fe-S proteins include aconitase of the tricarboxylic acid (TCA) cycle and succinate dehydrogenase of the respiratory chain [40, 41]. In most eukaryotic cells, the biogenesis of ISCs and Fe-S proteins occurs within the mitochondria via the ISC pathway. Plasmodium parasites, however, possess an additional ISC biogenesis pathway in the apicoplast, a vestigial plastid resembling the chloroplast [43, 44]. This pathway is known as the sulfur mobilization (SUF) pathway and has been shown to be essential for asexual blood stage development. Conditional knockout experiments targeting SufS, the first enzyme in the
SUF pathway during oocyst development, resulted in impaired sporozoite formation, underscoring the significance of the SUF pathway in sporozoite development. It has been reported previously that the deletion of hscB in P. berghei parasites did not exhibit significant impairment during the mosquito stage development.

Phenotype
Analysis of the mutant expressing a C-terminal GFP-tagged version of HscB showed the following:
- Evidence for expression in asexual blood stages as shown by flow-cytometric analysis
- Expression in oocysts. On day 12 post-feeding, we extracted midguts from the mosquitoes and stained them with the mitochondrial dye MitoView 650, while DNA was stained with Hoechst 33342. Live confocal microscopy imaging revealed overlapping signals between PbHscB-GFP and the mitochondrial dye, indicating that PbHscB-GFP localized to the mitochondria at this stage
- Expression in (maturing/mature) liver stages. The cells were fixed at 48 and 56 hours post-infection (hpi) and stained with antibodies against GFP and Toxoplasma gondii Hsp70 (TgHsp70), which has been shown to recognize P. berghei mitochondrial Hsp70. Although PbHscB-GFP expression was weak, a clear overlap between the PbHscB-GFP signal and the mitochondrial marker TgHsp70 was observed at both time points

Additional information
Analysis of a mutant lacking expression of HscB (RMgm-5640) showed the following:
Normal numbers of oocysts were produced (with a similar size as wild type oocysts). Normal numbers of (salivary gland) sporozoites were produced. Infection of mice with PbHscB-KO sporozoites resulted in blood stage infections with a prolonged prepatent period. All mice infected with wild type (WT) sporozoites were blood stage parasites positive on day 3 post-injection, while mice infected with PbHscB-KO sporozoites were positive on days 5 to 7 post-injection. PbHscB-KO liver stages appeared smaller compared to WT at 24, 48 and 56 hpi. Comparison of the parasite numbers at 6 and 48 hpi indicated reduced survival in the PbHscB-KO parasites. Merozoite surface protein 1 (MSP1) expression in liver stages at 56, 72 and 96 hpi. 

Other mutants


  Tagged: Mutant parasite with a tagged gene
Details of the target gene
Gene Model of Rodent Parasite PBANKA_0821000
Gene Model P. falciparum ortholog PF3D7_0920100
Gene productchaperone, putative
Gene product: Alternative nameHscB (heat shock cognate B)
Details of the genetic modification
Name of the tagGFP
Details of taggingC-terminal
Additional remarks: tagging
Commercial source of tag-antibodies
Type of plasmid/construct(Linear) plasmid single cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr
Promoter of the selectable markereef1a
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationTo generate an endogenously GFP-tagged parasite line for PbHscB, the C-terminal part of the gene PBANKA_0821000 was amplified (Fwd_Primer: AAggtacccaatccaattcatagATAGTAATAAATC/ Rev_Primer: AAgggcccTATATTTTGCAACCTATCC) and cloned into a vector containing a GFP and hdhfr as selection marker (resulting in a C-term HscB-GFP fusion protein). The construct was linearized with EcoRV restriction digest.
Additional remarks selection procedure
Primer information: Primers used for amplification of the target sequences  Click to view information
Primer information: Primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4
Sequence Primer 5
Additional information primer 5
Sequence Primer 6
Additional information primer 6

  Transgene: Mutant parasite expressing a transgene
Type and details of transgene
Is the transgene Plasmodium derived Transgene: not Plasmodium
Transgene namemCherry
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr/yfcu
Promoter of the selectable markereef1a
Selection (positive) procedureNo
Selection (negative) procedure5-fluorocytosine (5-FC)
Additional remarks genetic modificationThis reporter mutant expressing mCherry and Luciferase does not contain a drug-selectable
Additional remarks selection procedure
Other details transgene
Promoter
Gene Model of Parasite PBANKA_0711900
Gene Model P. falciparum ortholog PF3D7_0818900
Gene productheat shock protein 70
Gene product: Alternative nameHSP70
Primer information details of the primers used for amplification of the promoter sequence  Click to view information
Primer information details of the primers used for amplification of the promoter sequence  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
3'-UTR
Gene Model of Parasite PBANKA_0711900
Gene productheat shock protein 70
Gene product: Alternative nameHSP70
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to view information
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Insertion/Replacement locus
Replacement / InsertionReplacement locus
Gene Model of Parasite PBANKA_0306000
Gene product6-cysteine protein
Gene product: Alternative name230p
Primer information details of the primers used for amplification of the target sequences  Click to view information
Primer information details of the primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4

  Transgene: Mutant parasite expressing a transgene
Type and details of transgene
Is the transgene Plasmodium derived Transgene: not Plasmodium
Transgene nameLuciferase
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct(Linear) plasmid double cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitehdhfr/yfcu
Promoter of the selectable markereef1a
Selection (positive) procedureNo
Selection (negative) procedure5-fluorocytosine (5-FC)
Additional remarks genetic modificationThis reporter mutant expressing mCherry and Luciferase does not contain a drug-selectable
Additional remarks selection procedure
Other details transgene
Promoter
Gene Model of Parasite PBANKA_1133300
Gene Model P. falciparum ortholog PF3D7_1357100
Gene productelongation factor 1-alpha
Gene product: Alternative nameeef1a
Primer information details of the primers used for amplification of the promoter sequence  Click to view information
Primer information details of the primers used for amplification of the promoter sequence  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
3'-UTR
Gene Model of Parasite PBANKA_0719300
Gene productbifunctional dihydrofolate reductase-thymidylate synthase, putative
Gene product: Alternative namedhfr/ts
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to view information
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Insertion/Replacement locus
Replacement / InsertionReplacement locus
Gene Model of Parasite PBANKA_0306000
Gene product6-cysteine protein
Gene product: Alternative nameP230p
Primer information details of the primers used for amplification of the target sequences  Click to view information
Primer information details of the primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4