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Details of the target gene |
Gene Model of Rodent Parasite |
PBANKA_0818100
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Gene Model P. falciparum ortholog |
PF3D7_0917100
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Gene product | N-glycosylase/DNA lyase, putative |
Gene product: Alternative name | OGG1; PbOgg1 |
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Details of the genetic modification |
Inducable system used | No |
Additional remarks inducable system |
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Type of plasmid/construct used | (Linear) plasmid double cross-over |
PlasmoGEM (Sanger) construct/vector used | No |
Modified PlasmoGEM construct/vector used | No
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Plasmid/construct map |
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Plasmid/construct sequence |
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Restriction sites to linearize plasmid |
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Partial or complete disruption of the gene | Complete |
Additional remarks partial/complete disruption |
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Selectable marker used to select the mutant parasite | hdhfr/yfcu |
Promoter of the selectable marker | eef1a |
Selection (positive) procedure | pyrimethamine |
Selection (negative) procedure | No |
Additional remarks genetic modification | To disrupt PbOgg1, two fragments - F1 (0.54 kb) and F2 (0.57 kb) - encompassing the 5′ and 3′ untranslated regions (UTRs) were amplified using primers 1401/1402 and 1403/1404, respectively, and cloned in plasmid pBC-GFPhDHFR:yFCU. The integration cassette was released from the plasmid backbone by digestion with XhoI/AscI. |
Additional remarks selection procedure | |
Primer information: Primers used for amplification of the target sequences
Primer information: Primers used for amplification of the target sequences
Sequence Primer 1 | |
Additional information primer 1 | |
Sequence Primer 2 | |
Additional information primer 2 | |
Sequence Primer 3 | |
Additional information primer 3 | |
Sequence Primer 4 | |
Additional information primer 4 | |
Sequence Primer 5 | |
Additional information primer 5 | |
Sequence Primer 6 | |
Additional information primer 6 | |
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