RMgmDB - Rodent Malaria genetically modified Parasites

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Summary

RMgm-1242
Malaria parasiteP. berghei
Genotype
Transgene
Transgene not Plasmodium: GFP (fused to mtichondrial targeting sequence of PbATPβ)
Promoter: Gene model: PBANKA_1133300; Gene model (P.falciparum): PF3D7_1357100; Gene product: elongation factor 1-alpha (eef1a)
3'UTR: Gene model: PBANKA_0719300; Gene product: bifunctional dihydrofolate reductase-thymidylate synthase, putative (DHFR/TS)
Phenotype Asexual bloodstage; Gametocyte/Gamete; Oocyst; Sporozoite;
Last modified: 6 April 2015, 10:23
  *RMgm-1242
Successful modificationThe parasite was generated by the genetic modification
The mutant contains the following genetic modification(s) Introduction of a transgene
Reference (PubMed-PMID number) Reference 1 (PMID number) : 25831536
MR4 number
Parent parasite used to introduce the genetic modification
Rodent Malaria ParasiteP. berghei
Parent strain/lineP. berghei ANKA
Name parent line/clone Not applicable
Other information parent line
The mutant parasite was generated by
Name PI/ResearcherSturm A; McFadden GI
Name Group/DepartmentPlant Cell Biology Research Centre, School of BioSciences
Name InstituteUniversity of Melbourne
CityMelbourne
CountryAustralia
Name of the mutant parasite
RMgm numberRMgm-1242
Principal namePbβL-GFP
Alternative name
Standardized name
Is the mutant parasite cloned after genetic modificationYes
Phenotype
Asexual blood stagePbβL-GFP localized in mitochondria of bloodstages
Gametocyte/GametePbβL-GFP localized in mitochondria of gametocytes
Fertilization and ookineteNot tested
OocystPbβL-GFP localized in mitochondria of oocysts
SporozoitePbβL-GFP localized in mitochondria of sporozoites
Liver stageNot tested
Additional remarks phenotype

Mutant/mutation
A mutant expressing GFP fused to a targeting sequence for the mitochondrion, i.e. the first 240 bp of ATP synthase subunit beta, mitochondrial (PbATPβ protein).
The gfp gene is under control of the constitutive eefia promoter and is introduced into the silent p230p locus.

Protein (function)
The PbATPβ protein (PBANKA_145030) contains Walker A and B motifs, an ATP binding site, and a C-terminal PFAM domain shared by all ATP synthase β subunits. A Clustal Omega multiple sequence alignment with the Arabidopsis thaliana and the mouse ATP synthase β subunit gene revealed large areas of conserved amino acid sequence. The N terminus of the protein product of PBANKA_145030 is predicted to be a mitochondrial targeting peptide. Mitochondrial ATP synthase harvests the proton gradient generated across the inner mitochondrial membrane by mitochondrial electron transport to phosphorylate ADP. ATP synthases comprise multiple subunits assembled into two domains: a membrane-integrated F0 domain that generates rotation as a consequence of allowing protons to move down the gradient  across the membrane it occupies, and an extrinsic F1 domain that catalyzes attachment of inorganic phosphate to ADP using rotation energy. The F1 domain comprises α and β subunits, with the stoichiometry α3β3, and the β subunit contains the catalytic center for ATP formation. Yeast null mutants for ATP synthase β subunit lose mitochondrial ATPase activity, grow well on glucose but poorly on glycerol, and still form the F1 domain, albeit without a detectable β subunit.

Phenotype analyses of mutants lacking expression of  PbATPβ (RMgm-1239, RMgm-1240, RMgm-1241) indicate an essential role of the PbATPβ protein for development of zygotes/ookinetes in vivo.

Phenotype
Parasites accumulated GFP in a subcellular compartment also positive for the mitochondrial dye Rhodamine 123. The GFP/Rhodamine 123-positive structures exhibit the typical morphology of mitochondria in asexual and sexual blood cell life-cycle stages. To observe mitochondrial morphology in insect stages of P. berghei, A. stephensi mosquitoes were fed on mice infected with PbβL-GFP parasites, and oocyst development was observed and imaged at different days after infection. Seven days postinfection, the oocysts contained an extensively branched GFP-positive structure, which became increasingly branched with time and even developed lassolike loops. After 22 d, we detected sporozoites in the mosquito salivary glands showing a single GFP-positive structure.

Additional information
From the Introduction of the paper describing this mutant:
The production of ATP by most eukaryotes occurs in two phases: (i) glycolysis, which oxidizes glucose into pyruvate; and (ii) oxidative phosphorylation or chemiosmosis, in which pyruvate is fully oxidized into carbon dioxide and water within the mitochondrion. During chemiosmosis, the mitochondrial respiratory chain generates a proton gradient that drives a Rotary turbine, known as ATP synthase, located in the inner mitochondrial membrane. Chemiosmosis produces far more ATP than glycolysis but requires oxygen as a terminal electron acceptor. Blood-stage malaria parasites scavenge glucose from the host via a glucose transporter (1) and feed it into their glycolysis pathway. However, despite having access to oxygen, asexual blood-stage malaria parasites do not undertake appreciable chemiosmosis. Rather, they perform what is termed aerobic glycolysis, converting 93% of scavenged glucose into lactate to supply their ATP. Aerobic glycolysis is favored by rapidly growing cells (e.g., yeasts, cancer cells, bloodstream trypanosomes, and blood-stage malaria parasites) because it can support faster growth than chemiosmosis, the requirement for rapid growth apparently offsetting the low efficiency of glycolytic ATP production when glucose is abundant. Reduced chemiosmosis might also alleviate the production of reactive oxygen species, which could be problematic in conjunction with hemoglobin digestion practiced by blood-stage malaria parasites. Despite
the almost total reliance on anaerobic glycolysis by asexual bloodstage malaria parasites, a small amount of electron transport activity within the mitochondrion is crucial to regenerate ubiquinone required as the electron acceptor for dihydroorotate dehydrogenase, an essential enzyme for pyrimidine biosynthesis, and probably to maintain a proton gradient for essential mitochondrial processes such as protein import. Although the asexual blood-stage malaria parasites rely solely on aerobic glycolysis for energy generation, a small proportion of them undergo conversion to gametocytes, which execute a programmed remodeling of their central carbon metabolism. Gametocytes form in preparation for possible transmission to the insect phase of the life cycle should they be taken up in the blood meal of an anopheline mosquito. They are morphologically very distinct and express different genes to asexual blood-stage parasites, and their mitochondrion enlarges and develops distinct cristae (which are lacking in asexual bloodstage parasite  mitochondria). Gametocytes activate the tricarboxylic acid cycle, oxidizing glucose and also glutamate to prime their mitochondrial electron-transport chain. Initially it was not clear whether malaria parasites had a canonical tricarboxylic acid cycle, electron-transport chain, or ATP synthase complex. Various components were either not identifiable or seemed to have been replaced by noncanonical substitutes. Nevertheless, the current consensus is that tricarboxylic acid cycling, electron transport, and ATP synthesis happen in the parasite mitochondrion, just not very much in asexual blood-stage parasites. Indeed, genetic knockout studies have shown that components of the mitochondrial electron-transport chain are dispensable in blood-stage malaria parasites, so long as the ability to regenerate ubiquinone for pyrimidine synthesis is maintained  Electron transport-defective parasites exhibit a phenotype only in the insect stage, where they are unable to complete their development and cannot transmit back to a vertebrate.

Other mutants
RMgm-1239: mutant lacking expression of ATP synthase subunit beta, mitochondrial (PbATPβ protein)
RMgm-1240: A mutant lacking expression of ATP synthase subunit beta, mitochondrial (PbATPβ protein) and expressing YFP fused to the hdhfr selectable marker
RMgm-1241: A mutant lacking expression of ATP synthase subunit beta, mitochondrial (PbATPβ protein) and expressing dtTomato (red fluorescent) protein under the control of the hsp70 promoter.


  Transgene: Mutant parasite expressing a transgene
Type and details of transgene
Is the transgene Plasmodium derived Transgene: not Plasmodium
Transgene nameGFP (fused to mtichondrial targeting sequence of PbATPβ)
Details of the genetic modification
Inducable system usedNo
Additional remarks inducable system
Type of plasmid/construct(Linear) plasmid single cross-over
PlasmoGEM (Sanger) construct/vector usedNo
Modified PlasmoGEM construct/vector usedNo
Plasmid/construct map
Plasmid/construct sequence
Restriction sites to linearize plasmid
Selectable marker used to select the mutant parasitetgdhfr
Promoter of the selectable markerpbdhfr
Selection (positive) procedurepyrimethamine
Selection (negative) procedureNo
Additional remarks genetic modificationThe first 240 bp of the P. berghei putative, mitochondrial ATP synthase β subunit (PbATPβ; PBANKA_145030) were amplified by PCR using primers 21 and 42 (see below).
The PCR product was cloned into the BamHI site of the pL0017-GFPAPICO plasmid, which contains the Toxoplasma gondii dihydrofolate reductase-thymidylate synthase (TgDHFR/TS) resistance marker gene (RMgm-267). The resulting plasmid, pL0017-GFPβMITO,was transfected into P. berghei ANKA parasites as previously described, giving rise to the PbβL-GFP line.
primer 21: tgtGGATCCatgaataaatttcgatttttg (PbATPase-beta-BamHI2-s)
primer 42: tgtGGATCCaattgctggtggcgtatttt (PbATPase-beta-leader-BamHI-as)
Additional remarks selection procedure
Other details transgene
Promoter
Gene Model of Parasite PBANKA_1133300
Gene Model P. falciparum ortholog PF3D7_1357100
Gene productelongation factor 1-alpha
Gene product: Alternative nameeef1a
Primer information details of the primers used for amplification of the promoter sequence  Click to view information
Primer information details of the primers used for amplification of the promoter sequence  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
3'-UTR
Gene Model of Parasite PBANKA_0719300
Gene productbifunctional dihydrofolate reductase-thymidylate synthase, putative
Gene product: Alternative nameDHFR/TS
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to view information
Primer information details of the primers used for amplification the 3'-UTR sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Insertion/Replacement locus
Replacement / InsertionNot available
Gene Model of Parasite Not available
Gene productNot available
Gene product: Alternative namesmall subunit ribosomal rna gene (c/d-type unit)
Primer information details of the primers used for amplification of the target sequences  Click to view information
Primer information details of the primers used for amplification of the target sequences  Click to hide information
Sequence Primer 1
Additional information primer 1
Sequence Primer 2
Additional information primer 2
Sequence Primer 3
Additional information primer 3
Sequence Primer 4
Additional information primer 4